STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_76G01030Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (692 aa)    
Predicted Functional Partners:
ZOSMA_48G00860
Electron transfer flavoprotein subunit alpha.
  
 0.979
ZOSMA_99G00540
Electron transfer flavoprotein subunit beta, mitochondrial.
  
 0.977
ZOSMA_50G00960
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.960
A0A0K9PJA3
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.955
ZOSMA_84G00350
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.953
A0A0K9PLR2
Peroxisomal fatty acid beta-oxidation multifunctional protein.
  
 0.950
ZOSMA_3G00180
Enoyl CoA hydratase/isomerase.
  
 0.946
ZOSMA_56G00880
Acyl-CoA dehydrogenase.
  
 0.940
A0A0K9PCJ4
Peroxisomal acetoacetyl-CoA thiolase 2, Peroxisomal acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.932
A0A0K9PSP2
Cytosolic acetoacetyl-CoA thiolase 1, cytosolic acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.932
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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