STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_78G00230ATP-binding cassette. (591 aa)    
Predicted Functional Partners:
rps7
Ribosomal protein S7, mitochondrial.
  
 
 0.842
ZOSMA_34G01030
Ribosomal protein 5B; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.842
ZOSMA_22G01040
50S ribosomal protein L33.
  
 
 0.835
ZOSMA_86G00520
Uncharacterized protein.
  
 
 0.834
ZOSMA_7G01500
50S ribosomal protein L27.
  
 
 0.834
ZOSMA_65G00300
Putative 50S ribosomal protein L21.
  
   0.827
A0A0K9NYC8
50S ribosomal protein L21.
  
   0.827
ZOSMA_45G00050
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.825
ZOSMA_30G00020
60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.825
ZOSMA_80G00170
30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.818
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.