STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_6G00870Uncharacterized protein. (873 aa)    
Predicted Functional Partners:
ZOSMA_79G00570
Transcription initiation factor TFIID subunit.
    
 0.999
ZOSMA_75G00690
Transcription initiation factor TFIID subunit 1.
    
 0.999
ZOSMA_70G00810
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.999
ZOSMA_68G00690
Transcription initiation factor TFIID subunit.
    
 0.999
A0A0K9P277
Transcription initiation factor TFIID subunit 11.
    
 0.999
A0A0K9PRV1
TATA-box binding protein.
    
 0.999
A0A0K9Q0N3
Transcription initiation factor TFIID subunit.
    
 0.999
ZOSMA_4G00670
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
 0.995
ZOSMA_79G00520
TFIID_20kDa domain-containing protein.
    
 0.994
ZOSMA_7G01290
TFIID_20kDa domain-containing protein.
    
 0.994
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.