STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_68G00500tRNA (Guanine(37)-N1)-methyltransferase 2. (489 aa)    
Predicted Functional Partners:
ZOSMA_37G00970
Uncharacterized protein.
   
 
 0.862
ZOSMA_43G00450
Riboflavin kinase.
   
 
 0.711
A0A0K9PA80
Riboflavin kinase.
   
 
 0.711
ZOSMA_69G00180
TYW3 domain-containing protein.
  
 
 0.697
A0A0K9P1F5
Uncharacterized protein.
  
 
 0.697
A0A0K9PEZ1
tRNA wybutosine-synthesizing protein 2/3/4.
  
 
 0.697
A0A0K9PV97
Sulfite reductase [NADPH] flavoprotein alpha-component.
   
 
 0.645
A0A0K9PFC9
tRNA (Guanine-N1-)-methyltransferase.
   
  
 0.617
ZOSMA_24G00830
23S rRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
  
 0.567
ZOSMA_68G00180
tRNA (adenine(58)-N(1))-methyltransferase.
   
  
 0.558
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.