STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_68G00300Zinc transport protein zntB. (465 aa)    
Predicted Functional Partners:
A0A0K9P7T7
Sirohydrochlorin cobaltochelatase.
  
  
 0.665
ZOSMA_10G00430
Adenylyl-sulfate reductase (Glutathione).
  
  
 0.592
ZOSMA_2G03040
Sulfate adenylyltransferase.
  
  
 0.523
A0A0K9PVY5
UMP kinase.
  
    0.522
A0A0K9PX21
UMP kinase.
  
    0.522
ZOSMA_43G00450
Riboflavin kinase.
     
 0.512
A0A0K9Q6G2
Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.
     
 0.505
A0A0K9PG17
Methionyl-tRNA formyltransferase.
  
  
 0.491
ZOSMA_37G00570
FAD synthetase.
  
  
 0.481
ZOSMA_47G00500
RNA polymerase sigma factor sigA.
  
  
 0.474
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.