STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_68G00540Piwi domain-containing protein. (129 aa)    
Predicted Functional Partners:
ZOSMA_75G00810
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.814
ZOSMA_66G00390
DNA-directed RNA polymerase.
   
 0.814
ZOSMA_66G00410
Uncharacterized protein.
   
 0.814
ZOSMA_66G00400
DNA-directed RNA polymerase.
   
 0.814
A0A0K9Q0B1
Uncharacterized protein.
   
 0.814
ZOSMA_67G00350
Putative Importin-7.
    
 0.692
A0A0K9PP70
Translin-associated protein X.
    
 0.678
ZOSMA_99G00650
Translin family protein, expressed.
   
 0.677
ZOSMA_28G00710
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.667
A0A0K9PBQ2
Helicase ATP-binding domain-containing protein.
  
 0.660
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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