STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_70G00090Beta-galactosidase. (675 aa)    
Predicted Functional Partners:
ZOSMA_9G00290
Beta-galactosidase, family GH2.
  
 0.880
ZOSMA_68G00790
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.872
ZOSMA_80G00330
Beta-hexosaminidase, family GH20.
  
 
 0.862
A0A0K9PA58
Beta-hexosaminidase.
  
 
 0.862
A0A0K9PHM4
Beta-hexosaminidase.
  
 
 0.862
ZOSMA_56G01250
Alpha-galactosidase.
   
 
 0.855
ZOSMA_15G01490
Alpha-galactosidase.
   
 
 0.855
A0A0K9PM53
Xylose isomerase.
    
 0.852
A0A0K9PJ10
Beta-galactosidase.
  
  
 
0.837
ZOSMA_70G00140
Beta-galactosidase.
  
  
 
0.836
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.