STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_64G00880Putative Inter-alpha-trypsin inhibitor heavy chain. (746 aa)    
Predicted Functional Partners:
ZOSMA_14G00890
Brix domain-containing protein 1.
   
 
 0.772
ZOSMA_2G03550
SWI4 1, Peter Pan-like protein suppressor.
   
    0.746
ZOSMA_15G00320
Periodic tryptophan protein 2.
   
    0.626
A0A0K9PWW6
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.609
A0A0K9PXS6
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.609
ZOSMA_4G01220
60S ribosomal protein L5-1.
    
 
 0.601
ZOSMA_27G00040
60S ribosomal protein L5-1.
    
 
 0.601
A0A0K9PS77
60S ribosomal protein L5-1.
    
 
 0.601
ZOSMA_84G00390
60S ribosomal protein L11a; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.596
ZOSMA_11G00970
60S ribosomal protein L11-1; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.596
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.