STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_6G01950Hopanoid-associated sugar epimerase. (348 aa)    
Predicted Functional Partners:
ZOSMA_2G00760
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.931
ZOSMA_52G00890
40S ribosomal protein S29.
   
 0.919
A0A0K9PK03
30S ribosomal protein S9.
   
 0.915
ZOSMA_26G00610
Putative phytol kinase 2, chloroplastic.
     
 0.904
A0A0K9P9F6
Prenylcysteine oxidase 1.
     
 0.900
ZOSMA_26G01520
Clade-E Terpene synthase, putative Ent-kaur-16-ene synthase, chloroplastic; Belongs to the terpene synthase family.
     
 0.862
ZOSMA_27G01170
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.828
A0A0K9PU87
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.828
ZOSMA_6G00460
40S ribosomal protein S19-3.
   
 0.814
ZOSMA_1G01200
40S ribosomal protein S19-3.
   
 0.814
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.