STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_68G00240XH/XS domain-containing protein. (617 aa)    
Predicted Functional Partners:
ZOSMA_84G00350
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.949
A0A0K9PSK8
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
  0.874
A0A0K9PVP1
Glutamate carboxypeptidase 2.
  
 0.778
A0A0K9PYR3
Histone-lysine N-methyltransferase.
   
 0.720
ZOSMA_59G00550
Ribosomal RNA small subunit methyltransferase NEP1.
   
  0.685
ZOSMA_27G00130
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.683
ZOSMA_20G00580
rRNA-processing protein FCF1-like protein.
    
  0.683
A0A0K9PRI4
Nucleolar complex protein 4.
    
  0.683
ZOSMA_79G00440
Putative Something about silencing protein sas10.
    
  0.681
A0A0K9PQC5
Putative U3 small nucleolar RNA-associated protein.
    
  0.677
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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