STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_64G00020Putative WD-repeat protein. (595 aa)    
Predicted Functional Partners:
A0A0K9PWN1
Ran-binding protein 9.
   
 
 0.989
A0A0K9Q5E9
Armadillo repeat-containing protein.
    
 
 0.967
A0A0K9PVX6
RMD5-like protein.
   
 
 0.966
ZOSMA_49G00310
Ubiquitin-protein ligase 4.
   
  
 0.952
A0A0K9PX68
Ubiquitin-protein ligase 4.
   
  
 0.952
ZOSMA_43G00400
Uncharacterized protein.
    
 
 0.914
ZOSMA_25G01210
Uncharacterized protein.
    
 
 0.914
A0A0K9PX88
Uncharacterized protein.
    
 
 0.914
ZOSMA_8G01010
Protein yippee-like; Belongs to the yippee family.
   
 
 0.850
ZOSMA_7G00900
Protein yippee-like; Belongs to the yippee family.
   
 
 0.850
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.