STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9NVK5Aminotran_5 domain-containing protein. (138 aa)    
Predicted Functional Partners:
ZOSMA_59G00480
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.960
A0A0K9PFQ9
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.960
ZOSMA_52G01000
Ferroxidase.
   
 0.935
ZOSMA_54G01200
LYR motif-containing protein 4B; Belongs to the complex I LYR family.
   
 0.918
ZOSMA_54G00190
Thioredoxin reductase.
  
 
 0.871
A0A0K9P3F0
NifU-like protein 1, chloroplastic.
  
 0.838
A0A0K9PFT4
NifU domain protein.
  
 0.838
A0A0K9PNX3
Fe/S biogenesis protein nfuA.
  
 0.838
A0A0K9PZY5
NifU-like protein 3, chloroplastic.
  
 0.838
ZOSMA_10G00430
Adenylyl-sulfate reductase (Glutathione).
  
 
 0.747
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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