STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_56G00740UBA domain-containing protein. (414 aa)    
Predicted Functional Partners:
A0A0K9P3J9
Putative UBX domain-containing protein.
    
 0.979
A0A0K9PL78
UBX domain-containing protein.
    
 0.978
ZOSMA_28G00850
Putative UBX domain-containing protein.
    
 0.933
A0A0K9Q1X4
UBX domain-containing protein.
    
 0.933
ZOSMA_78G00200
Cell division control protein 48.
    
 0.915
ZOSMA_2G01650
Cell division control protein 48.
    
 0.915
ZOSMA_1G00600
AAA_lid_3 domain-containing protein.
    
 0.915
ZOSMA_1G00610
Uncharacterized protein.
    
 0.915
A0A0K9PTP7
NPL4-like protein.
   
 
 0.876
ZOSMA_98G00220
Putative UBX domain-containing protein.
    
 
 0.851
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.