STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_5G01670Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (160 aa)    
Predicted Functional Partners:
ZOSMA_46G00340
Putative Pre-mRNA-splicing factor syf2.
    
 0.999
ZOSMA_7G01320
PWI domain-containing protein.
    
 0.995
ZOSMA_10G00370
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
  0.994
ZOSMA_23G00970
Intron-binding protein aquarius.
    
 0.990
ZOSMA_3G00820
Uncharacterized protein.
    
  0.989
A0A0K9PMC8
U-box domain-containing protein 72.
    
 0.989
A0A0K9PYT4
Protein FAM32A-like protein.
    
  0.989
ZOSMA_6G01130
Pre-mRNA-splicing factor cwc25.
   
 0.987
ZOSMA_30G00030
CWF19-like 2, cell cycle control.
    
  0.987
ZOSMA_99G00740
Nkap_C domain-containing protein.
    
  0.985
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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