STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9NXL6Smr domain-containing protein. (158 aa)    
Predicted Functional Partners:
ZOSMA_32G00440
Uncharacterized protein.
   
   0.811
ZOSMA_19G00160
NADH-ubiquinone oxidoreductase B18 subunit family protein, expressed.
   
   0.791
ZOSMA_44G00480
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6.
   
   0.622
ZOSMA_46G00060
Uncharacterized protein.
   
   0.617
ZOSMA_31G00280
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.
   
   0.616
A0A0K9P1G5
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.594
A0A0K9PKB1
NADH dehydrogenase 1 alpha subcomplex subunit 8.
   
   0.578
ZOSMA_32G00120
Uncharacterized protein.
   
   0.574
ZOSMA_43G00590
NADH-ubiquinone oxidoreductase 39 kDa subunit.
   
   0.570
ZOSMA_68G00090
Uncharacterized protein.
    
   0.568
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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