STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_4G00720Uncharacterized protein. (58 aa)    
Predicted Functional Partners:
A0A0K9PR39
Heme A synthase.
    
 0.665
ZOSMA_79G00210
Uncharacterized protein.
  
 
 0.627
ZOSMA_15G01410
CAAX amino terminal protease family protein.
  
 
 0.627
ZOSMA_80G00370
Uncharacterized protein.
   
 
  0.490
ZOSMA_37G01290
Pullulanase / isoamylase, family GH13.
   
 
  0.490
ZOSMA_30G01240
Isoamylase, family GH13.
   
 
  0.490
A0A0K9PL50
Aamy domain-containing protein.
   
 
  0.490
ZOSMA_18G01310
Aamy domain-containing protein.
   
 
  0.490
A0A0K9PXN4
Aamy domain-containing protein.
   
 
  0.490
A0A0K9PYE7
Isoamylase, family GH13.
   
 
  0.490
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.