STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_4G00770Uncharacterized protein. (50 aa)    
Predicted Functional Partners:
ZOSMA_75G00650
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
   
 0.713
A0A0K9PEY4
3-dehydroquinate synthase.
   
 0.713
ZOSMA_21G00140
Shikimate dehydrogenase, 3-dehydroquinate dehydratase.
   
 0.713
ZOSMA_25G00880
Glutamyl-tRNA(Gln) amidotransferase subunit A.
   
 0.664
A0A0K9PYT9
Glutamyl-tRNA(Gln) amidotransferase subunit A.
   
 0.664
ZOSMA_27G01460
Uncharacterized protein.
    
 0.641
A0A0K9PGA1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.558
ZOSMA_16G00950
Manganese/iron superoxide dismutase 3.
     
 0.558
A0A0K9Q4M8
Mn/Fe superoxide dismutase family.
     
 0.558
ZOSMA_95G00270
Alpha-amylase.
   
 0.532
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.