STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_4G02190Kinase. (696 aa)    
Predicted Functional Partners:
ZOSMA_52G01220
Protein transport protein SEC61 gamma subunit.
   
 
 0.866
A0A0K9PI80
Chaperone protein dnaJ.
    
 
 0.845
A0A0K9PU09
Chaperone protein dnaJ.
    
 
 0.845
A0A0K9P541
Putative Translocation protein sec62.
    
 
 0.830
A0A0K9Q4A7
Putative Translocation protein sec62.
    
 
 0.830
ZOSMA_89G00150
Calcium-binding protein.
    
 0.749
A0A0K9PYD8
Putative MO25-like protein.
    
 0.749
ZOSMA_44G01530
Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
    
 
 0.652
ZOSMA_25G00600
Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
    
 
 0.652
ZOSMA_72G00400
Protein transport protein Sec61 subunit beta.
    
 
 0.557
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.