STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_49G01000AT hook motif DNA-binding family protein. (377 aa)    
Predicted Functional Partners:
A0A0K9PM79
Lin-9-like protein.
    
 0.498
ZOSMA_58G00210
Putative Replication protein A 30 kDa subunit.
    
  0.482
ZOSMA_36G00380
Putative Replication protein A 30 kDa subunit.
    
  0.482
ZOSMA_68G00710
Nicotinamide adenine dinucleotide transporter 2, mitochondrial; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.481
ZOSMA_34G01220
dUTP diphosphatase.
    
  0.481
A0A0K9PNR3
Mediator of RNA polymerase II transcription subunit 23.
    
  0.475
A0A0K9PJ24
DNA excision repair protein 1.
    
  0.464
A0A0K9PTP7
NPL4-like protein.
    
  0.434
ZOSMA_80G00400
Uncharacterized protein.
    
  0.419
ZOSMA_9G00620
Tesmin/TSO1-like CXC domain-containing protein.
    
  0.411
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.