STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_53G00730Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
A0A0K9PNS6
Mitochondrial Rho GTPase.
    
 0.651
ZOSMA_93G00520
Uncharacterized protein.
   
 
 0.519
ZOSMA_37G00910
Uncharacterized protein.
      
 0.471
ZOSMA_33G01300
SRP40_C domain-containing protein.
      
 0.471
ZOSMA_19G00670
Centromere protein O.
      
 0.471
A0A0K9PXD6
Putative 60S ribosome biogenesis protein Rrp14.
      
 0.471
A0A0K9Q320
Exocyst complex component SEC8.
    
 0.451
ZOSMA_19G00080
Guanine nucleotide-binding protein-like 3.
      
 0.424
A0A0K9Q3D1
Uncharacterized protein.
      
 0.424
ZOSMA_44G01570
Uncharacterized protein.
      
 0.422
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.