STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_52G00700Protochlorophyllide-dependent translocon component 52, chloroplastic. (536 aa)    
Predicted Functional Partners:
ZOSMA_84G00350
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 
 0.880
A0A0K9Q4F6
Senescence-inducible chloroplast stay-green protein 2.
   
 0.834
A0A0K9Q665
Rieske (2Fe-2S) domain-containing protein.
  
 
 0.799
ZOSMA_9G00110
Short-chain dehydrogenase/reductase family protein.
    
 0.782
ZOSMA_89G00830
Putative Ferredoxin-2.
  
 
 0.780
A0A0K9PMI1
Reductase.
  
 
 0.773
A0A0K9PTV9
Monodehydroascorbate reductase.
  
 
 0.773
ZOSMA_50G00730
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.772
ZOSMA_95G00060
Chlorophyllase.
     
 0.758
ZOSMA_78G00520
Senescence-inducible chloroplast stay-green protein 1.
     
 0.750
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.