STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_47G00390Uncharacterized protein. (873 aa)    
Predicted Functional Partners:
A0A0K9PH33
Uncharacterized protein.
    
 0.602
A0A0K9PYX9
Peptidase C50 domain-containing protein.
    
 0.547
ZOSMA_9G01450
Malate dehydrogenase.
   
 0.517
A0A0K9P9D6
Malate dehydrogenase.
   
 0.517
A0A0K9PWM7
Malate dehydrogenase.
   
 0.517
ZOSMA_50G00200
Pentatricopeptide repeat-containing protein.
    
 
 0.497
ZOSMA_98G00320
Uncharacterized protein.
  
     0.493
ZOSMA_85G00680
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
  0.484
A0A0K9NLJ9
Ldh_1_C domain-containing protein.
   
  0.484
ZOSMA_85G00700
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
  0.484
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.