STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_47G00670Putative 50S ribosomal protein L2. (235 aa)    
Predicted Functional Partners:
ZOSMA_23G00460
Putative 50S ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family.
 
 0.976
ZOSMA_38G00590
50S ribosomal protein L5.
 
 0.971
ZOSMA_41G00510
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.969
ZOSMA_1G01990
50S ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family.
  
 0.967
ZOSMA_13G00550
Ribosomal protein S6 family protein.
  
 
 0.964
ZOSMA_22G00890
Putative Ribosome maturation protein SBDS.
   
 
 0.960
ZOSMA_75G00450
50S ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
  
 0.959
ZOSMA_33G00520
50S ribosomal protein L25.
   
 
 0.959
ZOSMA_22G01040
50S ribosomal protein L33.
  
 
 0.959
ZOSMA_80G00170
30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
 
 
 0.958
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.