STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9NZY8Flap endonuclease 1. (925 aa)    
Predicted Functional Partners:
ZOSMA_25G00160
General transcription factor IIH subunit.
    
 0.994
ZOSMA_69G00650
General transcription factor IIH subunit.
    
 0.969
ZOSMA_31G01060
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.967
ZOSMA_75G00760
ERCC4 domain-containing protein.
   
 0.964
A0A0K9PTY7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.959
ZOSMA_78G00490
DNA excision repair protein E.
   
 0.957
ZOSMA_84G00280
Chromodomain-helicase-DNA-binding protein.
   
 0.957
ZOSMA_3G00920
Chromodomain-helicase-DNA-binding protein 2.
   
 0.957
ZOSMA_8G01270
Uncharacterized protein.
   
 0.952
ZOSMA_42G00800
Uncharacterized protein.
   
 0.952
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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