STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_50G00420Uncharacterized protein. (296 aa)    
Predicted Functional Partners:
ZOSMA_69G00110
Putative Chromodomain helicase DNA binding protein.
    
 0.708
ZOSMA_56G01570
Putative Chromodomain helicase DNA binding protein.
    
 0.708
ZOSMA_41G00840
Myb-like domain-containing protein.
    
 0.708
A0A0K9PC86
Uncharacterized protein.
    
 0.708
ZOSMA_49G00590
Cleavage stimulation factor-related WD40protein.
    
 0.694
ZOSMA_30G00930
WD-40 repeat-containing protein MSI1.
    
 0.694
A0A0K9PEL2
WD_REPEATS_REGION domain-containing protein.
    
 0.694
ZOSMA_24G01360
WD-40 repeat-containing protein MSI4.
    
 0.694
ZOSMA_21G01090
Histone-binding protein RBBP4.
    
 0.694
A0A0K9Q4G2
WD_REPEATS_REGION domain-containing protein.
    
 0.694
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.