STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9P0F3Putative Sec-independent protein translocase protein tatC. (355 aa)    
Predicted Functional Partners:
ZOSMA_28G00440
Sec-independent protein translocase protein TATA, chloroplastic.
 
 0.995
ZOSMA_79G00380
CYTB_NTER domain-containing protein.
  
 
 0.687
A0A0K9P2X6
Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
  
 
 0.582
ZOSMA_23G00530
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.582
A0A0K9P220
Putative tatC-like protein ycf43.
  
  
 
0.557
A0A0K9PIM6
Putative Sec-independent protein translocase protein tatC.
  
  
 
0.549
ZOSMA_54G00040
Uncharacterized protein.
     
  0.540
A0A0K9P534
Sec-independent protein translocase protein TATB, chloroplastic.
  
  
 0.475
A0A0K9Q1B7
Trigger factor-like protein TIG.
     
 0.474
ZOSMA_53G00030
Putative Signal recognition particle protein.
     
 0.470
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.