STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_4G00990DUF4005 domain-containing protein. (730 aa)    
Predicted Functional Partners:
ZOSMA_88G00090
Hsp70 nucleotide exchange factor fes1.
   
 0.704
ZOSMA_81G00050
60S ribosomal protein L10.
   
 0.704
A0A0K9P7R5
Hsp70 nucleotide exchange factor fes1.
   
 0.704
A0A0K9PXB9
Fes1 domain-containing protein.
   
 0.704
A0A0K9Q5C4
50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family.
   
 0.704
ZOSMA_79G00380
CYTB_NTER domain-containing protein.
   
  
 0.468
ZOSMA_53G00490
30S ribosomal protein S18 family; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.459
ZOSMA_65G01050
Uncharacterized protein.
   
  
 0.435
ZOSMA_32G00190
RRM domain-containing protein; Belongs to the universal ribosomal protein uS19 family.
    
 
 0.431
ZOSMA_54G00040
Uncharacterized protein.
   
  
 0.424
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.