STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9P1E4Putative DNA repair helicase rad5,16. (1087 aa)    
Predicted Functional Partners:
A0A0K9PTY7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.910
ZOSMA_27G01460
Uncharacterized protein.
  
0.864
ZOSMA_55G00100
RuvB-like helicase; Belongs to the RuvB family.
    
 0.857
ZOSMA_25G01520
Actin-related protein; Belongs to the actin family.
   
 0.781
A0A0K9PIR7
Uncharacterized protein.
   
 0.781
A0A0K9PTT1
Putative DNA methyltransferase 1-associated protein.
    
 0.780
A0A0K9Q5Z3
INO80 complex subunit C.
    
 0.766
A0A0K9PSB5
RuvB-like helicase; Belongs to the RuvB family.
   
 0.764
ZOSMA_83G00510
Uncharacterized protein.
   
 0.737
A0A0K9P7U1
Uncharacterized protein.
   
 0.737
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.