STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_48G00420Uncharacterized protein. (852 aa)    
Predicted Functional Partners:
ZOSMA_12G00170
Uncharacterized protein.
  
     0.487
A0A0K9PZ18
Zinc finger CCCH domain-containing protein 17.
  
     0.474
A0A0K9PSA6
Transducin/WD40 repeat-like superfamily protein.
  
     0.460
A0A0K9PKA5
Putative WD-repeat protein.
  
     0.456
A0A0K9PNJ9
Putative WD-repeat protein.
  
     0.455
ZOSMA_30G00180
Cell division cycle 20.1, cofactor of APC complex.
  
     0.449
ZOSMA_36G00540
Cell division cycle 20.1, cofactor of APC complex.
  
     0.447
ZOSMA_22G00190
Cell division cycle protein 20.
  
     0.445
ZOSMA_12G00820
Putative WD-repeat protein.
  
     0.445
A0A0K9Q079
Cell division cycle 20.1, cofactor of APC complex.
  
     0.441
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.