STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9P252PHD finger protein ALFIN-LIKE 5. (258 aa)    
Predicted Functional Partners:
ZOSMA_72G00640
B30.2/SPRY domain-containing protein.
   
 
 0.828
ZOSMA_52G00830
Retinoblastoma-binding protein.
    
 
 0.819
ZOSMA_87G00030
Uncharacterized protein.
    
 
 0.812
ZOSMA_31G00120
Uncharacterized protein.
    
 
 0.805
ZOSMA_88G00400
WD repeat protein-like.
    
 
 0.630
ZOSMA_68G00530
WD repeat protein-like.
    
 
 0.630
ZOSMA_77G00820
SWI/SNF-related matrix-associated actin-dependent regulator ofchromatin subfamily D member 1.
    
 
 0.545
ZOSMA_26G00070
Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.450
A0A0K9P2H9
Ubiquitin-40S ribosomal protein S27a-1.
    
   0.414
ZOSMA_24G01040
Ubiquitin-40S ribosomal protein S27a.
    
   0.414
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.