STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_46G00390Ubiquitin-conjugating enzyme E2 22; Belongs to the ubiquitin-conjugating enzyme family. (260 aa)    
Predicted Functional Partners:
ZOSMA_21G00950
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.941
ZOSMA_49G00310
Ubiquitin-protein ligase 4.
    
 0.937
A0A0K9PX68
Ubiquitin-protein ligase 4.
    
 0.937
ZOSMA_50G00060
Putative Anaphase-promoting complex subunit.
    
 0.936
ZOSMA_7G00050
Anaphase promoting complex subunit 6/cell division cycle protein(IC).
    
 0.924
ZOSMA_27G00570
GLTSCR1 domain-containing protein.
    
 0.918
ZOSMA_17G00700
Anaphase promoting complex subunit 8/cell division cycle protein23-like protein.
    
 0.918
ZOSMA_72G00660
Anaphase-promoting complex subunit 11.
   
 0.913
A0A0K9PBR9
Anaphase-promoting complex subunit.
    
  0.913
A0A0K9Q6G6
Anaphase-promoting complex subunit 11.
   
 0.913
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.