STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9P2D3G-beta repeat protein. (1647 aa)    
Predicted Functional Partners:
ZOSMA_22G00800
Vacuolar protein sorting 45; Belongs to the STXBP/unc-18/SEC1 family.
   
 
  0.596
ZOSMA_99G00680
Guanine nucleotide-binding protein subunit beta-like protein.
    
 0.553
ZOSMA_67G00030
Guanine nucleotide-binding protein subunit beta-like protein.
    
 0.553
A0A0K9PRT6
Ribosomal RNA large subunit methyltransferase I.
    
 0.553
A0A0K9NS68
Uncharacterized protein.
   
 
  0.471
ZOSMA_15G01020
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein.
      
 0.470
ZOSMA_25G01140
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
  
     0.453
ZOSMA_99G00600
Uncharacterized protein.
     
 0.437
ZOSMA_64G00350
EH domain-containing protein 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.437
ZOSMA_54G00510
EH domain-containing protein 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.437
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.