STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9P376Cytochrome b561 and DOMON domain-containing protein. (422 aa)    
Predicted Functional Partners:
A0A0K9PP07
50S ribosomal protein L23.
   
 
 0.705
ZOSMA_42G00260
Uncharacterized protein.
   
   0.702
A0A0K9Q5C4
50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family.
   
   0.638
ZOSMA_63G00250
50S ribosomal protein L28.
   
   0.636
ZOSMA_89G00730
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.612
ZOSMA_24G01150
Putative 50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.612
A0A0K9Q337
MRP-S28 domain-containing protein.
   
   0.603
ZOSMA_22G01040
50S ribosomal protein L33.
   
   0.583
ZOSMA_3G02060
50S ribosomal protein L34.
   
 
 0.580
ZOSMA_60G00320
Mitochondrial ribosomal protein L43.
    
   0.568
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.