STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_37G00610Myb domain protein 94. (269 aa)    
Predicted Functional Partners:
ZOSMA_68G00200
HTH myb-type domain-containing protein.
  
     0.514
A0A0K9PZI0
Glutamate--cysteine ligase; Belongs to the carboxylate-amine ligase family. Glutamate--cysteine ligase type 2 subfamily.
   
 
 0.508
A0A0K9PM79
Lin-9-like protein.
    
 0.461
ZOSMA_20G01250
TCP transcription factor 17.
    
 
 0.425
ZOSMA_10G00260
TCP transcription factor 17.
    
 
 0.425
A0A0K9PQS0
Uncharacterized protein.
  
   
0.409
ZOSMA_67G00420
GDSL esterase/lipase.
    
 
 0.407
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.