STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_37G00710BRCA1-A complex subunit BRE. (375 aa)    
Predicted Functional Partners:
ZOSMA_24G01450
BRISC and BRCA1-A complex member 1.
    
  0.918
ZOSMA_17G00800
Lys-63-specific deubiquitinase BRCC36.
    
  0.718
ZOSMA_30G00810
Uncharacterized protein.
    
  0.604
A0A0K9PK17
Uncharacterized protein.
    
  0.604
A0A0K9PWR7
Uncharacterized protein.
    
  0.604
ZOSMA_5G02840
Uncharacterized protein.
   
  0.588
ZOSMA_62G00050
E3 ubiquitin-protein ligase KEG.
   
  0.533
ZOSMA_25G00880
Glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.522
A0A0K9PYT9
Glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.522
A0A0K9PCA9
E3 ubiquitin-protein ligase PRT1.
    
 0.484
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.