STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9P5L1Uncharacterized protein. (209 aa)    
Predicted Functional Partners:
ZOSMA_5G02440
Integrator complex subunit 9.
   
 0.993
ZOSMA_11G00930
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.989
ZOSMA_78G00980
Uncharacterized protein.
   
 0.988
ZOSMA_1G00930
Uncharacterized protein.
   
 0.967
ZOSMA_26G01060
DNA-directed RNA polymerases I, II, and III subunit RPABC3; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.903
ZOSMA_25G01500
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.903
ZOSMA_69G00950
Metallo-beta-lactamase family protein.
   
 0.852
ZOSMA_37G01000
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.852
A0A0K9Q2U0
Metallo-beta-lactamase family protein.
   
 0.852
ZOSMA_10G00660
Cleavage and polyadenylation specificity factor subunit 3-I.
   
 0.852
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.