STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_38G00450Beta-1,3-endoglucanase, family GH17; Belongs to the glycosyl hydrolase 17 family. (486 aa)    
Predicted Functional Partners:
A0A0K9PB36
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.948
ZOSMA_74G00020
Non-structural maintenance of chromosomes element 1.
    
 0.946
A0A0K9PGZ1
Structural maintenance of chromosomes protein 5.
   
 0.945
ZOSMA_52G00120
E3 SUMO-protein ligase MMS21.
    
 0.944
ZOSMA_46G00280
AAA_23 domain-containing protein.
   
 0.913
ZOSMA_46G00270
Structural maintenance of chromosomes protein 6A.
   
 0.913
ZOSMA_19G00810
Beta-glucosidase, family GH3.
    
  0.855
A0A0K9P9Q3
Beta-glucosidase, family GH3.
    
  0.808
ZOSMA_70G00200
Structural maintenance of chromosomes protein.
    
 0.743
ZOSMA_2G00900
Beta-glucosidase, family GH3.
    
  0.729
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.