STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_33G00750Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (354 aa)    
Predicted Functional Partners:
A0A0K9P1F4
Autophagy-related protein.
   
 0.708
ZOSMA_7G01840
Uncharacterized protein.
     
 0.655
ZOSMA_29G01660
Putative acyl-activating enzyme 19.
     
 0.655
ZOSMA_25G00880
Glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.510
A0A0K9PYT9
Glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.510
A0A0K9Q5W7
DIOX_N domain-containing protein.
  
     0.463
A0A0K9PNY7
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.426
A0A0K9PST0
Ornithine aminotransferase.
   
 
 0.418
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.