STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_32G00470Pathogenesis-related thaumatin-like protein. (300 aa)    
Predicted Functional Partners:
A0A0K9Q022
Protein kinase superfamily protein.
   
 0.597
A0A0K9P7A4
Uncharacterized protein.
   
 0.587
ZOSMA_21G00930
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
  0.578
A0A0K9PTN8
3-deoxy-D-manno-octulosonic acid transferase, family GT30.
    
  0.574
ZOSMA_87G00690
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
  0.472
ZOSMA_56G01130
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
  0.472
ZOSMA_4G00800
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
  0.472
ZOSMA_24G01020
Uncharacterized protein.
    
  0.472
ZOSMA_21G00020
Dual specificity protein phosphatase 8.
   
  0.472
A0A0K9PCA9
E3 ubiquitin-protein ligase PRT1.
    
  0.470
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.