STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_2G00050Phosphomethylpyrimidine synthase. (640 aa)    
Predicted Functional Partners:
ZOSMA_89G00300
Thiamine-phosphate diphosphorylase, Hydroxymethylpyrimidine kinase.
 
 0.991
ZOSMA_26G01570
Transcriptional activator, TenA family.
  
 
 0.979
A0A0K9PRL1
Phosphoribosylglycinamide formyltransferase 2.
    
 0.856
A0A0K9Q231
Phosphoribosylglycinamide formyltransferase 2.
    
 0.856
ZOSMA_72G00100
Phosphoribosylaminoimidazolesuccinocarboxamide synthase.
    
 0.797
A0A0K9P014
Uncharacterized protein.
  
 
 0.736
A0A0K9Q1Y5
Phosphoribosylformylglycinamidine cyclo-ligase.
  
 
 0.736
A0A0K9Q6E7
Phosphoribosylformylglycinamidine cyclo-ligase.
  
 
 0.736
ZOSMA_99G00850
Pyridoxal kinase.
    
 0.733
ZOSMA_27G01100
Biotin synthase.
  
  
 0.671
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.