STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PAA9TPR_REGION domain-containing protein. (339 aa)    
Predicted Functional Partners:
ZOSMA_96G00550
Calcium homeostasis regulator CHoR1.
   
  
 0.535
ZOSMA_8G01450
Putative Apoptosis-inducing factor.
      
 0.471
ZOSMA_44G01170
Uncharacterized protein.
      
 0.424
ZOSMA_2G01530
TPR_REGION domain-containing protein.
      
 0.422
A0A0K9NVQ9
Photosystem I assembly protein ycf3.
      
 0.420
A0A0K9PYT9
Glutamyl-tRNA(Gln) amidotransferase subunit A.
      
 0.420
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.