STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_2G00540Kinase family protein. (443 aa)    
Predicted Functional Partners:
ZOSMA_14G01450
Phototropin-2.
 
      0.642
A0A0K9Q2F1
Phototropin-1.
 
      0.591
ZOSMA_64G00560
BHLH domain-containing protein.
    
 
 0.419
ZOSMA_18G00430
BHLH domain-containing protein.
    
 
 0.419
A0A0K9Q2R8
BHLH domain-containing protein.
    
 
 0.419
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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