STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_32G00110Protein TIC 20-I, chloroplastic. (257 aa)    
Predicted Functional Partners:
ZOSMA_58G00970
Uncharacterized protein.
  
   0.920
ZOSMA_28G00470
Protein TOC75-3, chloroplastic.
  
 
 
 0.908
ZOSMA_5G02910
Uncharacterized protein.
   
   0.807
A0A0K9PQ42
Uncharacterized protein.
   
   0.798
ZOSMA_56G00030
AIG1-type G domain-containing protein.
    
 
 0.656
ZOSMA_2G03440
Translocase of chloroplast.
    
 
 0.656
A0A0K9PF83
Translocase of chloroplast.
    
 
 0.656
A0A0K9P5H5
Tic20 family protein Ycf60.
  
   
 0.619
ZOSMA_93G00960
Tic20 family protein Ycf60.
      
 0.472
ZOSMA_83G00440
Protein TIC 40, chloroplastic.
      
 0.472
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.