ZOSMA_32G00440 protein (Zostera marina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ZOSMA_32G00440

Uncharacterized protein. (81 aa)

Predicted Functional Partners:

ZOSMA_19G00160

0.997

ZOSMA_44G00480

0.995

A0A0K9P1G5

0.995

A0A0K9PKB1

0.994

ZOSMA_46G00060

0.989

ZOSMA_31G00280

0.988

A0A0K9PTK9

0.987

ZOSMA_9G00750

0.980

ZOSMA_52G01110

0.977

ZOSMA_43G00590

0.976

Your Current Organism:

Zostera marina

NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0K9P1G5	A0A0K9PKB1	A0A0K9P1G5	A0A0K9PKB1	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase 1 alpha subcomplex subunit 8.	0.999
A0A0K9P1G5	A0A0K9PTK9	A0A0K9P1G5	A0A0K9PTK9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Ubiquinol-cytochrome c reductase complex protein.	0.999
A0A0K9P1G5	ZOSMA_19G00160	A0A0K9P1G5	A0A0K9PN82	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase B18 subunit family protein, expressed.	0.999
A0A0K9P1G5	ZOSMA_31G00280	A0A0K9P1G5	A0A0K9PB16	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.	0.999
A0A0K9P1G5	ZOSMA_32G00440	A0A0K9P1G5	A0A0K9PAQ5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.995
A0A0K9P1G5	ZOSMA_43G00590	A0A0K9P1G5	A0A0K9P3Q5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 39 kDa subunit.	0.999
A0A0K9P1G5	ZOSMA_44G00480	A0A0K9P1G5	A0A0K9P103	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6.	0.999
A0A0K9P1G5	ZOSMA_46G00060	A0A0K9P1G5	A0A0K9P040	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.985
A0A0K9P1G5	ZOSMA_52G01110	A0A0K9P1G5	A0A0K9NZS2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.	0.999
A0A0K9P1G5	ZOSMA_9G00750	A0A0K9P1G5	A0A0K9NIQ3	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase (Ubiquinone) Fe-S protein 4.	0.999
A0A0K9PKB1	A0A0K9P1G5	A0A0K9PKB1	A0A0K9P1G5	NADH dehydrogenase 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
A0A0K9PKB1	A0A0K9PTK9	A0A0K9PKB1	A0A0K9PTK9	NADH dehydrogenase 1 alpha subcomplex subunit 8.	Ubiquinol-cytochrome c reductase complex protein.	0.999
A0A0K9PKB1	ZOSMA_19G00160	A0A0K9PKB1	A0A0K9PN82	NADH dehydrogenase 1 alpha subcomplex subunit 8.	NADH-ubiquinone oxidoreductase B18 subunit family protein, expressed.	0.999
A0A0K9PKB1	ZOSMA_31G00280	A0A0K9PKB1	A0A0K9PB16	NADH dehydrogenase 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.	0.999
A0A0K9PKB1	ZOSMA_32G00440	A0A0K9PKB1	A0A0K9PAQ5	NADH dehydrogenase 1 alpha subcomplex subunit 8.	Uncharacterized protein.	0.994
A0A0K9PKB1	ZOSMA_43G00590	A0A0K9PKB1	A0A0K9P3Q5	NADH dehydrogenase 1 alpha subcomplex subunit 8.	NADH-ubiquinone oxidoreductase 39 kDa subunit.	0.999
A0A0K9PKB1	ZOSMA_44G00480	A0A0K9PKB1	A0A0K9P103	NADH dehydrogenase 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6.	0.999
A0A0K9PKB1	ZOSMA_46G00060	A0A0K9PKB1	A0A0K9P040	NADH dehydrogenase 1 alpha subcomplex subunit 8.	Uncharacterized protein.	0.973
A0A0K9PKB1	ZOSMA_52G01110	A0A0K9PKB1	A0A0K9NZS2	NADH dehydrogenase 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.	0.999
A0A0K9PKB1	ZOSMA_9G00750	A0A0K9PKB1	A0A0K9NIQ3	NADH dehydrogenase 1 alpha subcomplex subunit 8.	NADH dehydrogenase (Ubiquinone) Fe-S protein 4.	0.999