STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_29G00260Uncharacterized protein. (287 aa)    
Predicted Functional Partners:
ZOSMA_2G00940
Vacuolar sorting ATPase; Belongs to the AAA ATPase family.
   
 0.921
ZOSMA_41G00500
Charged multivesicular body protein 3.
    
 0.761
A0A0K9PQL9
Uncharacterized protein.
    
 0.746
ZOSMA_4G00560
SNF7 family protein.
    
 0.711
A0A0K9PYN5
Vacuolar protein sorting-associated protein VTA1-like protein.
   
 
 0.704
A0A0K9Q2R0
Vacuolar protein sorting-associated protein VTA1-like protein.
   
 
 0.704
ZOSMA_66G00300
Charged multivesicular body protein 4b.
    
 0.655
A0A0K9PD73
Uncharacterized protein.
    
 0.655
A0A0K9PH81
Uncharacterized protein.
    
 0.655
A0A0K9PPF2
Uncharacterized protein.
    
 0.655
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.