STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_2G02460Oxidoreductase, 2OG-Fe(II) oxygenase family protein. (665 aa)    
Predicted Functional Partners:
A0A0K9PV71
YTH domain containing 2.
      
 0.516
ZOSMA_37G00970
Uncharacterized protein.
   
 
 0.506
ZOSMA_4G00510
F-box/kelch-repeat protein.
      
 0.471
A0A0K9PYW6
Histone-lysine N-methyltransferase setd3.
      
 0.433
ZOSMA_7G01320
PWI domain-containing protein.
      
 0.426
A0A0K9PLD3
Uncharacterized protein.
      
 0.424
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.