STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PBS8Transmembrane emp24 domain-containing protein 3. (212 aa)    
Predicted Functional Partners:
ZOSMA_20G01080
Transmembrane emp24 domain-containing protein 10.
   
 0.957
ZOSMA_25G01330
Transmembrane emp24 domain-containing protein p24delta3.
   
 0.956
A0A0K9Q547
Transmembrane emp24 domain-containing protein p24delta3.
   
 0.956
ZOSMA_9G00240
Protein transport protein SEC31.
    
 0.712
ZOSMA_44G00720
ADP-ribosylation factor family protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.712
A0A0K9PDL5
ADP-ribosylation factor family protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.712
A0A0K9Q1Q4
Transcription factor bHLH64.
   
 0.712
A0A0K9PCF1
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
  0.694
A0A0K9PJ42
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
  0.694
ZOSMA_26G01000
Putative ADP-ribosylation factor GTPase-activating protein AGD8.
    
  0.693
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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