STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PBX4Uncharacterized protein. (143 aa)    
Predicted Functional Partners:
A0A0K9PCW3
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.812
ZOSMA_46G00090
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.720
A0A0K9P1C9
Chromatin modification-related protein MEAF6.
    
 0.711
A0A0K9Q517
Chromatin modification-related protein MEAF6.
    
 0.711
A0A0K9PTT1
Putative DNA methyltransferase 1-associated protein.
   
 0.686
A0A0K9Q0N3
Transcription initiation factor TFIID subunit.
   
 0.664
A0A0K9PQT8
Mortality factor 4 like 1.
   
 0.592
ZOSMA_75G00690
Transcription initiation factor TFIID subunit 1.
    
 0.587
ZOSMA_70G00810
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.575
ZOSMA_26G00070
Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.557
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.