STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_30G00620Flowering time control protein FCA. (694 aa)    
Predicted Functional Partners:
A0A0K9Q6H2
Uncharacterized protein.
    
 
 0.568
A0A0K9Q1Z7
RNA binding.
    
 
0.567
A0A0K9NWS0
Putative WD-repeat protein.
   
 
 0.551
ZOSMA_23G01480
Plant-type CRYPTOCHROME 1.2.
   
  
 0.499
ZOSMA_79G00550
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 
 0.485
A0A0K9PNT1
Putative agamous-like MADS-box protein AGL21-related ZmMADS4, AGL17/ANR1 sub-family.
      
 0.473
ZOSMA_15G00560
Gibberellin 20 oxidase 2; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.470
ZOSMA_55G00480
Floral homeotic protein APETALA 1-1.
      
 0.420
ZOSMA_41G01040
Lysine-specific histone demethylase 1.
      
 0.414
A0A0K9Q3I5
Gibberellin 20 oxidase 1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.410
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.