STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PCA37-hydroxymethyl chlorophyll a reductase, chloroplastic. (456 aa)    
Predicted Functional Partners:
ZOSMA_3G01180
Chlorophyll synthase.
  
  
 0.925
A0A0K9PNY2
Chlorophyll synthase.
  
  
 0.925
ZOSMA_9G00110
Short-chain dehydrogenase/reductase family protein.
   
 0.924
A0A0K9Q495
Chlorophyll(Ide) b reductase NOL, chloroplastic; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.924
A0A0K9Q4F6
Senescence-inducible chloroplast stay-green protein 2.
    
 0.890
ZOSMA_35G00640
Uncharacterized protein.
     
 0.870
A0A0K9Q1G5
Stress-response A/B barrel domain-containing protein.
     
 0.870
ZOSMA_8G00580
Uncharacterized protein.
    
 0.859
ZOSMA_8G00570
Pyr_redox_2 domain-containing protein.
    
 0.859
ZOSMA_57G00690
Sorbitol dehydrogenase.
  
 
 0.853
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.